alleleTools.format.tests package

Submodules

• alleleTools.format.tests.test_consensus module
  • make_report()
  • test_allele_sorting()
  • test_consensus()
  • test_overlapping_allele_consensus()
• alleleTools.format.tests.test_gene_report module
  • TestGeneConsensus
  • test_gene_asdict()
  • test_gene_mean_coverage()
  • test_read_reports_asdf()
  • test_remove_HLA_prefix()
  • test_report_aslist()
• alleleTools.format.tests.test_hla_group module
  • test_2f_allele_grouping()
  • test_3f_allele_grouping()
• alleleTools.format.tests.test_ukb2allele module
  • test_allele_formatting()
  • test_convert_ukb_to_allele()
  • test_fill_allele_pairs()
  • test_fill_allele_pairs_unsorted()
  • test_remove_pheno_zero()
• alleleTools.format.tests.test_vcf2allele module
  • test_read_vcf()